Introduction
Overview of PDBLib
- Compiling and Loading
- Memory Management Considerations
- PDB Syntax
- PDBLib Rules
Summary of the C API
- Some Guidance in Using the C API to PDBLib
- Opening, Creating and Closing PDB Files
- Writing Data to PDB Files
- Reading Data from PDB Files
- Defining New Data Types
- Defining Attributes
- Using Pointers
- Terms
- Function Summary
The C API
- PD_APPEND
- PD_APPEND_ALT
- PD_APPEND_AS
- PD_APPEND_AS_ALT
- PD_CAST
- PD_CD
- PD_CLOSE
- PD_DEF_ATTRIBUTE
- PD_DEFENT
- PD_DEFENT_ALT
- PD_DEFIX
- PD_DEFLOAT
- PD_DEFNCV
- PD_DEFSTR
- PD_DEFSTR_ALT
- PD_FAMILY
- PD_FLUSH
- PD_GET_ATTRIBUTE
- PD_LN
- PD_LS
- PD_MKDIR
- PD_OPEN
- PD_PWD
- PD_READ
- PD_READ_ALT
- PD_READ_AS
- PD_READ_AS_ALT
- PD_RESET_PTR_LIST
- PD_REM_ATTRIBUTE
- PD_SET_ATTRIBUTE
- PD_TARGET
- PD_TYPEDEF
- PD_WRITE
- PD_WRITE_ALT
- PD_WRITE_AS
- PD_WRITE_AS_ALT
Summary of the FORTRAN API
- Some Guidance in Using the FORTRAN API to PDBLib
- Opening, Creating and Closing PDB Files
- Writing Data to PDB Files
- Reading Data from PDB Files
- Defining New Data Types
- Defining Attributes
- Queries
- Function Summary
The FORTRAN API
- PFAPAD (PD_append_as_alt)
- PFAPAS (PD_append_as)
- PFAPPA (PD_append)
- PFAPPD (PD_append_alt)
- PFCD (PD_cd)
- PFCLOS (PD_close)
- PFDATT (PD_def_attribute)
- PFDEFA (PD_defent)
- PFDEFD (PD_defent_alt)
- PFDEFS (PD_defstr))
- PFDEFT (PD_defstr_alt)
- PFFAMI (PD_family)
- PFFLSH (PD_flush)
- PFGFNM
- PFGLS
- PFGVAR
- PFGVAT (PD_get_attribute)
- PFIMBR
- PFLN (PD_ln)
- PFLST (PD_ls)
- PFMKDR (PD_mkdir)
- PFOPEN (PD_open)
- PFPTRD (PD_read_alt)
- PFPWD
- PFRATT (PD_rem_attribute)
- PFRDAD (PD_read_as_alt)
- PFRDAS (PD_read_as)
- PFREAD (PD_read)
- PFSVAT (PD_set_attribute)
- PFTRGT (PD_target)
- PFVART
- PFWIMA
- PFWMAP
- PFWRAD (PD_write_as_alt)
- PFWRAN
- PFWRAS (PD_write_as)
- PFWRTA (PD_write)
- PFWRTD (PD_write_alternate)
- PFWSET)
PDBLib Design Philosophy
- Overview
- Data Conversion and Compression
- DATA_STANDARDS
- Floating Point Format Descriptor
- Byte Ordering
- DATA_ALIGNMENTS
Data Structures in PDBLib
- DATA_ALIGNMENT
- DATA_STANDARD
- DEFSTR
- DIMDES
- MEMDES
- PDBFILE
- SYMENT
PDBLib by Example
- Working with PDB files
- Writing Data to PDB files
- Reading Data from PDB files
- Inquiries in PDBLib
- Writing PM_mappings with PFWMAP
- Writing PM_mappings with PFWSET and PFWRAN
Related Documentation